Sequence Similarity Clusters for the Entities in PDB 1FWH

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 31 1791
95 % 16 31 2323 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 16 31 2390
70 % 34 51 1404
50 % 35 53 1181
40 % 35 53 1220
30 % 35 53 1253
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 31 1779
95 % 16 31 2361 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 16 31 2414
70 % 16 31 2477
50 % 16 31 2512
40 % 16 31 2533
30 % 16 31 2516
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72998
95 % 16 31 2330 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 16 31 2376
70 % 16 31 2453
50 % 34 56 1019
40 % 34 56 1053
30 % 34 56 1098

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures