Sequence Similarity Clusters for the Entities in PDB 1FRF

Entity #1 | Chains: S
[NI-FE] HYDROGENASE protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 75652
95 % 20 20 1029 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 20 20 1074
70 % 20 20 1095
50 % 46 47 661
40 % 67 68 493
30 % 67 68 525
Entity #2 | Chains: L
[NI-FE] HYDROGENASE protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 75651
95 % 20 20 1028 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 20 20 1073
70 % 20 20 1093
50 % 46 47 682
40 % 86 88 383
30 % 86 88 393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures