Sequence Similarity Clusters for the Entities in PDB 1FM5

Entity #1 | Chains: A
EARLY ACTIVATION ANTIGEN CD69 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 10706
95 % 5 5 11398 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 5 5 10167
70 % 5 5 10780
50 % 5 5 9881
40 % 5 5 9337
30 % 5 5 8639

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures