Sequence Similarity Clusters for the Entities in PDB 1F2T

Entity #1 | Chains: A
RAD50 ABC-ATPASE protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 22207
95 % 1 3 21580 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 1 3 23178
70 % 1 3 19356
50 % 1 3 17209
40 % 1 3 15857
30 % 1 3 15500
Entity #2 | Chains: B
RAD50 ABC-ATPASE protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32311
95 % 1 3 23889 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.3
PDBFlex
90 % 1 3 23179
70 % 1 3 21210
50 % 1 3 17210
40 % 1 3 15858
30 % 1 3 15501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures