Sequence Similarity Clusters for the Entities in PDB 1EP3

Entity #1 | Chains: A
DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 35157
95 % 1 3 28126 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 1 5 13133
70 % 1 5 12017
50 % 1 5 11002
40 % 1 5 10346
30 % 1 5 9556
Entity #2 | Chains: B
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 32115
95 % 1 3 28427 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 27383
70 % 1 5 11808
50 % 1 5 10787
40 % 1 5 10530
30 % 1 5 9715

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures