Sequence Similarity Clusters for the Entities in PDB 1EER

Entity #1 | Chains: A
ERYTHROPOIETIN protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73004
95 % 1 3 26106 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 3 24577
70 % 1 3 22428
50 % 1 3 19795
40 % 1 3 18108
30 % 1 3 16238
Entity #2 | Chains: B,C
ERYTHROPOIETIN RECEPTOR protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47422
95 % 1 16 2140 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 2.3
PDBFlex
90 % 1 16 2232
70 % 1 16 2293
50 % 1 16 2327
40 % 1 16 2359
30 % 1 16 2345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures