Sequence Similarity Clusters for the Entities in PDB 1ED1

Entity #1 | Chains: A
GAG POLYPROTEIN protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38359
95 % 1 2 40890 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 29774
70 % 1 5 15665
50 % 1 5 14115
40 % 1 5 13148
30 % 1 5 11920

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures