Sequence Similarity Clusters for the Entities in PDB 1E4W

Entity #1 | Chains: H
TAB2 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37688
95 % 1 3 28355 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 3 27352
70 % 631 2928 1
50 % 673 3079 1
40 % 673 3079 1
30 % 1326 6153 1
Entity #2 | Chains: L
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35185
95 % 1 2 28356 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 16 73 459
70 % 507 2391 2
50 % 643 3030 2
40 % 643 3030 2
30 % 1327 6153 1
Entity #3 | Chains: P
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures