Sequence Similarity Clusters for the Entities in PDB 1E12

Entity #1 | Chains: A
HALORHODOPSIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 79379
95 % 2 6 14644 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 2 6 14422
70 % 2 6 13603
50 % 2 6 12331
40 % 2 6 11526
30 % 2 6 10539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures