Sequence Similarity Clusters for the Entities in PDB 1DO8

Entity #1 | Chains: A,B,C,D
MALIC ENZYME protein, length: 564 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 1385
95 % 5 10 1630 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 5 10 1695
70 % 5 10 1727
50 % 6 12 1583
40 % 8 18 949
30 % 8 18 992

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures