Sequence Similarity Clusters for the Entities in PDB 1DNW

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 18 1192
95 % 5 18 1578 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 18 1613
70 % 5 18 1656
50 % 5 18 1690
40 % 5 18 1740
30 % 5 18 1766
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 18 1191
95 % 5 18 1590 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 5 18 1612
70 % 5 18 1653
50 % 5 18 1689
40 % 5 18 1758
30 % 5 18 1776

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures