Sequence Similarity Clusters for the Entities in PDB 1DKY

Entity #1 | Chains: A,B
DNAK protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 35829
95 % 32 35 971 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.9
PDBFlex
90 % 32 35 1006
70 % 32 35 1038
50 % 32 35 1073
40 % 35 38 1024
30 % 35 38 1073
Entity #2 | Chains: C,D
PEPTIDE SUBSTRATE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures