Sequence Similarity Clusters for the Entities in PDB 1DEK

Entity #1 | Chains: A,B
DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24120
95 % 1 2 24253 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 23518
70 % 1 2 20438
50 % 1 2 18099
40 % 1 2 16636
30 % 1 2 15008

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures