Sequence Similarity Clusters for the Entities in PDB 1DD1

Entity #1 | Chains: A,B,C
SMAD4 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34234
95 % 3 7 6076 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.2
PDBFlex
90 % 2 3 9341
70 % 3 7 6004
50 % 3 7 5749
40 % 3 7 5596
30 % 3 7 5291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures