Sequence Similarity Clusters for the Entities in PDB 1D7W

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 18 1163
95 % 7 18 1564 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 7 18 1587
70 % 7 18 1624
50 % 7 18 1640
40 % 7 18 1706
30 % 7 18 1737
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 18 1159
95 % 7 18 1568 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 7 18 1596
70 % 7 18 1632
50 % 7 18 1655
40 % 7 18 1710
30 % 7 18 1745

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5FIW 1 A, B MYELOPEROXIDASE UNP RESIDUES 167-271 9606 1.11.2.2 | Details
2 1DNU 1 A, B MYELOPEROXIDASE MYELOPEROXIDASE LIGHT CHAIN CONTAINING RESIDUES 1 TO 104 9606 1.11.2.2 | Details
3 1CXP 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
4 1D5L 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
5 1DNW 1 A, B MYELOPEROXIDASE MYELOPEROXIDASE LIGHT CHAIN CONTAINING RESIDUES 1 TO 104 9606 1.11.2.2 | Details
6 1D2V 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
7 1D7W 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
8 4DL1 1 A, B, E, F, I, J, M, N Myeloperoxidase light chain 9606 1.11.2.2 | Details
9 1MHL 1 A, B MYELOPEROXIDASE ISOFORM C 9606 1.11.2.2 | Details
10 4C1M 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
11 3ZS0 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
12 5WDJ 1 A, D Myeloperoxidase UNP residues 167-271 9606 1.11.2.2 | Details
13 3ZS1 1 A, B MYELOPEROXIDASE LIGHT CHAIN 9606 1.11.2.2 | Details
14 5QJ3 1 A, D Myeloperoxidase 9606 1.11.2.2 | Details
15 5QJ2 1 A, D, F, H Myeloperoxidase 9606 1.11.2.2 | Details
16 3F9P 1 A, B Myeloperoxidase Light chain: UNP residues 165-278 9606 1.11.2.2 | Details
17 1MYP 1 A, B MYELOPEROXIDASE 9612 1.11.2.2 | Details
18 4EJX 2 B Myeloperoxidase light chain UNP residues 165-278 9606 1.11.2.2 | Details