1D4I

HIV-1 protease in complex with the inhibitor BEA425


Sequence Similarity Clusters for the Entities in PDB 1D4I

Entity #1 | Chains: A,B
HIV-1 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 99 181
95 % 194 647 2
90 % 202 737 2
70 % 220 782 5
50 % 224 808 5
40 % 224 808 6
30 % 224 808 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1NH0 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
2 2QNP 1 A, B Gag-Pol polyprotein (Pr160Gag-Pol) HIV-1 retropepsin 11676 3.4.23.16 | Details
3 2QNN 1 A, B Gag-Pol polyprotein (Pr160Gag-Pol) HIV-1 retropepsin 11676 3.4.23.16 | Details
4 2BB9 1 A, B Protease 11676 3.4.23.16 | Details
5 2PWR 1 A, B Gag-Pol polyprotein (Pr160Gag-Pol) 11676 3.4.23.16 | Details
6 1XL2 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
7 2PQZ 1 A, B Protease 11676 3.4.23.16 | Details
8 1D4I 1 A, B HIV-1 PROTEASE 12721 3.4.23.16 | Details
9 3CKT 1 A, B Protease 11676 3.4.23.16 | Details
10 2PWC 1 A, B Gag-Pol polyprotein (Pr160Gag-Pol) 11676 3.4.23.16 | Details
11 1DIF 1 A, B HIV-1 PROTEASE 11676
12 4I8Z 1 A, B Protease 11676 3.4.23.16 | Details
13 1IIQ 1 A, B PROTEASE RETROPEPSIN HIV-1 PROTEASE 11676 3.4.23.16 | Details
14 2ZGA 1 A Protease 11676 3.4.23.16 | Details
15 1HVK 1 A, B HIV-1 PROTEASE 11676
16 1SP5 1 A, B Protease 11676 3.4.23.16 | Details
17 1XL5 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
18 3BHE 1 A, B Protease 11676 3.4.23.16 | Details
19 1HVI 1 A, B HIV-1 PROTEASE 11676
20 2BBB 1 A, B Protease 11676 3.4.23.16 | Details
21 3BGC 1 A, B Protease UNP residues 501-599 11682 3.4.23.16 | Details
22 1HVL 1 A, B HIV-1 PROTEASE 11676
23 2UXZ 1 A, B HIV-1 PROTEASE COMPLEX WITH INHIBITOR AHA708A RESIDUES 501-599 11676 3.4.23.16 | Details
24 1EC0 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
25 2CEN 1 A, B POL PROTEIN COMPLEX WITH INHIBITOR AHA478 11676 3.4.23.16 | Details
26 1W5V 1 A, B HIV-1 PROTEASE RESIDUES 58-167 12721 3.4.23.16 | Details
27 1W5W 1 A, B POL POLYPROTEIN RESIDUES 58-167 12721 3.4.23.16 | Details
28 5TYR 1 A, B Protease 11676
29 1EBW 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
30 1G35 1 A, B HIV-1 PROTEASE 11676 3.4.23.16 | Details
31 2WKZ 1 A, B PROTEASE COMPLEX WITH INHIBITOR COMPOUND AHA599 RESIDUES 501-599 11676 3.4.23.16 | Details
32 1D4H 1 A, B HIV-1 PROTEASE 12721 3.4.23.16 | Details
33 1D4J 1 A, B HIV-1 PROTEASE 12721 3.4.23.16 | Details
34 2UY0 1 A, B HIV-1 PROTEASE COMPLEX WITH INHIBITOR AHA722 RESIDUES 501-599 11676 3.4.23.16 | Details
35 6D0D 1 A, B Protease 11676
36 3BGB 1 A, B Protease UNP residues 501-599 11682 3.4.23.16 | Details
37 1HVJ 1 A, B HIV-1 PROTEASE 11676
38 1AJX 1 A, B HIV-1 PROTEASE 11676 3.4.23.16 | Details
39 1W5Y 1 A, B POL POLYPROTEIN RESIDUES 58-167 12721 3.4.23.16 | Details
40 1HPV 1 A, B HIV-1 PROTEASE 11676 3.4.23 | Details
41 1HSG 1 A, B HIV-1 PROTEASE NY5 ISOLATE 11676 3.4.23 | Details
42 1HPX 1 A, B HIV-1 PROTEASE 11676
43 2BPY 1 A, B HIV-1 PROTEASE COMPLEXED WITH L-739,622 11676 3.4.23.16 | Details
44 1EC3 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
45 1W5X 1 A, B POL POLYPROTEIN RESIDUES 58-167 12721 3.4.23.16 | Details
46 2BPV 1 A, B HIV-1 PROTEASE COMPLEXED WITH L-738,317 11676 3.4.23.16 | Details
47 4HLA 1 A, B Protease 11676 3.4.23.16 | Details
48 1NPA 1 A, B POL polyprotein protease, residue 69-167 11676 3.4.23.16 | Details
49 4FE6 1 A HIV protease 11676 3.4.23.16 | Details
50 4I8W 1 A, B Protease 11676 3.4.23.16 | Details
51 1EBZ 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
52 1AJV 1 A, B HIV-1 PROTEASE 11676 3.4.23.16 | Details
53 6D0E 1 A, B Protease 11676
54 1G2K 1 A, B PROTEASE RETROPEPSIN RESIDUES 1-99 11676 3.4.23.16 | Details
55 1NPW 1 A, B POL polyprotein HIV-1 PROTEASE 11676 3.4.23.16 | Details
56 1HIH 1 A, B HIV-1 PROTEASE 11676 3.4.23 | Details
57 1HTG 1 A, B HIV-1 PROTEASE 11676
58 1WBK 1 A, B POL PROTEIN (FRAGMENT) RESIDUES 1-99 11676
59 2CEM 1 A, B POL PROTEIN COMPLEX WITH INHIBITOR AHA480 11676 3.4.23.16 | Details
60 5TYS 1 A, B Protease 11676
61 3PSU 1 A Protease 11676 3.4.23.16 | Details
62 7UPJ 1 A, B HIV-1 PROTEASE 11676 3.4.23.16 | Details
63 1ZSR 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
64 1EC2 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
65 1NPV 1 A, B POL polyprotein HIV protease 11676 3.4.23.16 | Details
66 1ZSF 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
67 1WBM 1 A, B POL PROTEIN (FRAGMENT) RESIDUES 1-99 11676
68 1OHR 1 A, B ASPARTYLPROTEASE COMPLEXED WITH VIRACEPT 11676
69 2AQU 1 A, B HIV-1 Protease HIV-1 Protease, residues 69-167 11676 3.4.23.16 | Details
70 1EC1 1 A, B HIV-1 PROTEASE FRAGMENT 69-167 11676 3.4.23.16 | Details
71 2BQV 1 A, B HIV-1 PROTEASE COMPLEX WITH INHIBITOR AHA455 11676 3.4.23.16 | Details
72 3T11 1 A, B HIV-1 Protease UNP residues 501-599 11676 3.4.23.16 | Details
73 1HTF 1 A, B HIV-1 PROTEASE 11676
74 1GNO 1 A, B HIV-1 PROTEASE 11676 2.7.7.49 | Details
75 1HBV 1 A, B HIV-1 PROTEASE 11676
76 1UPJ 1 A HIV-1 PROTEASE 11676
77 1HOS 1 A, B HIV-1 PROTEASE 11676
78 1U8G 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
79 1HPS 1 A, B HIV-1 PROTEASE 11676
80 1C70 1 A, B PROTEIN (PROTEASE) NY5 ISOLATE 11676 3.4.23 | Details
81 2QNQ 1 A, B Gag-Pol polyprotein (Pr160Gag-Pol) HIV-1 retropepsin 11676 3.4.23.16 | Details
82 2BPZ 1 A, B HIV-1 PROTEASE COMPLEXED WITH L-739,622 11676 3.4.23.16 | Details
83 2A4F 1 A, B Pol polyprotein HIV protease 11676 3.4.23.16 | Details
84 1M0B 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
85 1HTE 1 A, B HIV-1 PROTEASE 11676
86 2BPW 1 A, B HIV-1 PROTEASE COMPLEXED WITH L-738,317 11676 3.4.23.16 | Details
87 2UPJ 1 A, B HIV-1 PROTEASE 11676 3.4.23.16 | Details
88 2BPX 1 A, B HIV-1 PROTEASE COMPLEXED WITH L-735,524 11676 3.4.23.16 | Details
89 1HHP 1 A UNLIGANDED HIV-1 PROTEASE 11676
90 3PHV 1 A UNLIGANDED HIV-1 PROTEASE 11676
91 3GGA 1 A, B, C, D, G, H V-1 protease 11676
92 2FDE 1 A, B Gag-Pol polyprotein protease 11676 3.4.23.16 | Details
93 2CEJ 1 A, B POL PROTEIN COMPLEX WITH INHIBITOR AHA459 11676 3.4.23.16 | Details
94 3GGX 1 A, B, C, D, E, F, G, H V-1 protease 11676
95 1FQX 1 A, B PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
96 3GGV 1 A, B, C, D, E, F, G, H, I V-1 protease 11676
97 1YT9 1 A, B Pol polyprotein HIV protease 11676
98 1T7K 1 A, B Pol polyprotein [Contains: Protease (Retropepsin)] HIV Protease 11676 3.4.23.16 | Details
99 1MUI 1 A, B protease residues 57-155 11676 3.4.23.16 | Details