Sequence Similarity Clusters for the Entities in PDB 1D0A

Entity #1 | Chains: A,B,C,D,E,F
TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2 protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 3098
95 % 4 6 1834 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 4 6 1873
70 % 4 10 1370
50 % 4 13 1159
40 % 4 13 1201
30 % 4 13 1243
Entity #2 | Chains: G,H,I,J,K,L
OX40L RECEPTOR PEPTIDE protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures