Sequence Similarity Clusters for the Entities in PDB 1CXF

Entity #1 | Chains: A
CYCLODEXTRIN GLYCOSYLTRANSFERASE protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 34978
95 % 11 24 2870 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 11 24 2949
70 % 22 44 1206
50 % 28 54 1039
40 % 30 56 1050
30 % 30 56 1093

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures