Sequence Similarity Clusters for the Entities in PDB 1COH

Entity #1 | Chains: A,C
HEMOGLOBIN (FERROUS CARBONMONOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 216 219 43
95 % 253 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 254 257 44
70 % 335 340 22
50 % 724 735 7
40 % 724 735 7
30 % 772 783 10
Entity #2 | Chains: B,D
HEMOGLOBIN (COBALTOUS DEOXY) (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 164 166 78
95 % 255 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 259 261 37
70 % 348 353 17
50 % 725 735 7
40 % 725 735 7
30 % 773 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures