Sequence Similarity Clusters for the Entities in PDB 1CMX

Entity #1 | Chains: A,C
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56630
95 % 1 1 42023
90 % 1 1 39269
70 % 1 1 34786
50 % 1 1 30226
40 % 1 1 27378
30 % 8 14 3455
Entity #2 | Chains: B,D
PROTEIN (UBIQUITIN YUH1-UBAL) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 197 387 4
95 % 245 485 6
90 % 251 498 6
70 % 280 548 9
50 % 282 563 11
40 % 282 567 14
30 % 290 583 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures