Sequence Similarity Clusters for the Entities in PDB 1CLO

Entity #1 | Chains: L
A5B7 MONOCLONAL ANTIBODY protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68002
95 % 1 4 17231 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 23 147 155
70 % 725 2373 2
50 % 922 3008 2
40 % 922 3008 2
30 % 1890 6105 1
Entity #2 | Chains: H
A5B7 MONOCLONAL ANTIBODY protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68003
95 % 1 1 55148
90 % 24 39 1283
70 % 901 2908 1
50 % 955 3053 1
40 % 955 3053 1
30 % 1891 6105 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures