Sequence Similarity Clusters for the Entities in PDB 1C5B

Entity #1 | Chains: L
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 49682
95 % 2 2 32812 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 5 10 8841
70 % 605 2399 2
50 % 770 3045 2
40 % 770 3045 2
30 % 1582 6183 1
Entity #2 | Chains: H
CHIMERIC DECARBOXYLASE ANTIBODY 21D8 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 53103
95 % 2 2 33372 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 2 2 35243
70 % 752 2943 1
50 % 800 3094 1
40 % 800 3094 1
30 % 1583 6183 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures