Sequence Similarity Clusters for the Entities in PDB 1C30

Entity #1 | Chains: A,C,E,G
CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 1941
95 % 3 10 1696 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 10 1721
70 % 3 10 1767
50 % 3 10 1809
40 % 3 10 1849
30 % 3 10 1883
Entity #2 | Chains: B,D,F,H
CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 11078
95 % 3 10 1676 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 3 10 1703
70 % 3 10 1746
50 % 3 10 1812
40 % 3 10 1852
30 % 3 10 1884

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures