Sequence Similarity Clusters for the Entities in PDB 1BYU

Entity #1 | Chains: A,B
PROTEIN (GTP-BINDING PROTEIN RAN) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57860
95 % 24 74 465 Flexibility: Medium
Max RMSD: 15.6, Avg RMSD: 6.1
PDBFlex
90 % 24 75 489
70 % 25 78 496
50 % 25 78 523
40 % 25 78 562
30 % 25 78 592

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures