1BL3

CATALYTIC DOMAIN OF HIV-1 INTEGRASE


Sequence Similarity Clusters for the Entities in PDB 1BL3

Entity #1 | Chains: A,B,C
INTEGRASE protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 8511
95 % 137 179 132
90 % 137 179 137
70 % 27 47 922
50 % 27 48 914
40 % 28 51 892
30 % 28 51 933

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3WNF 1 A, B Gag-Pol polyprotein Catalytic core domain, UNP residue 1203-1359 11676
2 3WNH 1 A, B Gag-Pol polyprotein Catalytic core domain, UNP residue 1203-1359 11676
3 5KRT 1 A Integrase unp residues 57-207 11676
4 5KRS 1 A Integrase 11676
5 3VQ7 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
6 3VQ5 1 A, B POL polyprotein integrase core domain, UNP residues 771-927 11676
7 3WNG 1 A, B Gag-Pol polyprotein Catalytic core domain, UNP residue 1203-1359 11676
8 3WNE 1 A, B Gag-Pol polyprotein Catalytic core domain, UNP residue 1203-1359 11676
9 3VQ8 1 A, B POL polyprotein integrase core domain, UNP residues 771-927 11676
10 3VQE 1 A, B POL polyprotein integrase core domain, UNP residues 771-927 11676
11 1EXQ 1 A, B POL POLYPROTEIN HIV-1 INTEGRASE CATALYTIC CORE 11676
12 3AO2 1 A, B POL polyprotein Integrase CATALYTIC CORE DOMAIN, UNP residues 765-927 11676
13 1B9D 1 A PROTEIN (INTEGRASE) CATALYTIC CORE DOMAIN 11676 2.7.7.49 | Details
14 3VQ6 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
15 1B9F 1 A PROTEIN (INTEGRASE) CATALYTIC CORE DOMAIN 11676 2.7.7.49 | Details
16 3AO3 1 A, B POL polyprotein Integrase CATALYTIC CORE DOMAIN, UNP residues 765-927 11676
17 4ID1 1 A Gag-Pol polyprotein 11676 2.7.7.49 | Details 2.7.7.7 | Details 3.1.13.2 | Details 3.1.26.13 | Details 3.4.23.16 | Details
18 3VQ9 1 A, B, C POL polyprotein integrase core domain, UNP residues 765-925 11676
19 4TSX 1 A Integrase Catalytical core Domain, UNP residues 50-212 11676
20 3VQQ 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
21 3VQ4 1 A, B POL polyprotein Integrase CATALYTIC CORE DOMAIN, UNP residues 770-927 11676
22 3VQA 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
23 3AO5 1 A, B POL polyprotein Integrase CATALYTIC CORE DOMAIN, UNP residues 765-927 11676
24 3AO4 1 A, B POL polyprotein Integrase CATALYTIC CORE DOMAIN, UNP residues 765-927 11676
25 4O0J 1 A Integrase 11676
26 3VQD 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
27 1BL3 1 A, B, C INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
28 4JLH 1 A HIV-1 Integrase catalytic core domain 11676
29 3VQP 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
30 3VQB 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
31 1B92 1 A PROTEIN (INTEGRASE) CATALYTIC CORE DOMAIN 11676 2.7.7.49 | Details
32 6EX9 1 A Integrase 11676
33 4O55 1 A Integrase 11676
34 6JCF 1 A Integrase HIV-1 Integrase catalytic core domain 11676
35 4GVM 1 A Gag-Pol polyprotein UNP residues 1197-1359 11676 2.7.7.49 | Details 2.7.7.7 | Details 3.1.13.2 | Details 3.1.26.13 | Details 3.4.23.16 | Details
36 4O5B 1 A Integrase 11676
37 5KGW 1 A Integrase 11676
38 1BHL 1 A HIV-1 INTEGRASE RESIDUES CAS 65 AND CAS 130 ARE CACODYLATED CYSTEINES CATALYTIC CORE DOMAIN, RESIDUES 50 - 212 11676 2.7.7.49 | Details
39 6JCG 1 A Integrase HIV-1 Integrase catalytic core domain 11676
40 3VQC 1 A, B POL polyprotein integrase core domain, UNP residues 770-927 11676
41 5EU7 1 A, B Integrase Integrase Central Core Domain Catalytic Core Domain, UNP residues 36-188 11676 2.7.7 | Details
42 2ITG 1 A HUMAN IMMUNODEFICIENCY VIRUS-1 INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
43 5KGX 1 A Integrase 11676
44 4GW6 1 A Gag-Pol polyprotein UNP residues 1197-1359 11676 2.7.7.49 | Details 2.7.7.7 | Details 3.1.13.2 | Details 3.1.26.13 | Details 3.4.23.16 | Details
45 4DMN 1 A HIV-1 Integrase 11676
46 1BI4 1 A, C INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
47 1BI4 2 B INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
48 1C6V 1 A, B, C, D PROTEIN (SIV INTEGRASE) RESIDUES 813-976 11723