1BL3

CATALYTIC DOMAIN OF HIV-1 INTEGRASE


Sequence Similarity Clusters for the Entities in PDB 1BL3

Entity #1 | Chains: A,B,C
INTEGRASE protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 8569
95 % 137 179 133
90 % 137 179 139
70 % 27 47 928
50 % 27 48 920
40 % 28 51 900
30 % 28 51 941

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3VQ9 1 A, B, C POL polyprotein integrase core domain, UNP residues 765-925 11676
2 1BL3 1 A, B, C INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
3 1BHL 1 A HIV-1 INTEGRASE RESIDUES CAS 65 AND CAS 130 ARE CACODYLATED CYSTEINES CATALYTIC CORE DOMAIN, RESIDUES 50 - 212 11676 2.7.7.49 | Details
4 2ITG 1 A HUMAN IMMUNODEFICIENCY VIRUS-1 INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676
5 1BI4 1 A, C INTEGRASE CATALYTIC CORE DOMAIN 50 - 212 11676