Sequence Similarity Clusters for the Entities in PDB 1BIJ

Entity #1 | Chains: A,C
HEMOGLOBIN A protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 148 219 43
95 % 178 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 179 257 44
70 % 220 340 22
50 % 488 735 7
40 % 488 735 7
30 % 529 783 10
Entity #2 | Chains: B,D
HEMOGLOBIN A protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 166 78
95 % 186 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 188 261 37
70 % 236 353 17
50 % 489 735 7
40 % 489 735 7
30 % 530 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures