Sequence Similarity Clusters for the Entities in PDB 1BD9

Entity #1 | Chains: A,B
PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16298
95 % 3 4 15430 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 6 8907
70 % 7 11 4749
50 % 7 11 4610
40 % 7 11 4513
30 % 7 11 4369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures