Sequence Similarity Clusters for the Entities in PDB 1B86

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN; ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 156 219 43
95 % 189 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 190 257 44
70 % 235 340 22
50 % 520 735 7
40 % 520 735 7
30 % 563 783 10
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN; BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 117 166 78
95 % 196 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 199 261 37
70 % 251 353 17
50 % 521 735 7
40 % 521 735 7
30 % 564 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures