1AW8

PYRUVOYL DEPENDENT ASPARTATE DECARBOXYLASE


Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 29054
95 % 2 2 23183
90 % 2 2 22529
70 % 2 2 20620
50 % 5 8 2572
40 % 5 8 2566
30 % 5 8 2565
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55841
95 % 1 1 38681
90 % 1 1 36875
70 % 9 9 5722
50 % 9 9 5516
40 % 13 13 4255
30 % 13 13 4161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5LS7 3 D Aspartate 1-decarboxylase The N-terminal residue is a pyruvoyl moiety formed after post-translation backbone cleavage after protein folding. Cysteine 78 is oxidised. 562 4.1.1.11 | Details 4.1.3.30 | Details
2 4AON 2 B, E ASPARTATE-ALPHA-DECARBOXYLASE ALPHA CHAIN POSTTRANSLATIONAL MAIN CHAIN BREAK BETWEEN CHAIN A GLY24 AND CHAIN B SER25. SAME FOR CHAINS C AND D. SERINE 25 MODIFIED TO YIELD A PYRUVOYL COFACTOR IN BOTH CASES. IN THIS STRUCTURE THE BOUND LIGAND HAS FORMED A COVALENT IMINIUM INTERMEDIATE WITH PYR -25 IN BOTH SUBUNITS IN THE ASYMMETRIC UNIT 562 4.1.1.11 | Details 4.1.3.30 | Details
3 4AOK 2 B, E ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN POSTTRANSLATIONAL MAIN CHAIN BREAK BETWEEN CHAIN A GLY24 AND CHAIN B SER25. SAME FOR CHAINS D AND E. SERINE 25 MODIFIED TO YIELD A PYRUVOYL COFACTOR IN BOTH CASES. IN THIS STRUCTURE THE BOUND LIGAND HAS FORMED A COVALENT IMINIUM INTERMEDIATE WITH PYR 25 IN BOTH SUBUNITS IN THE ASYMMETRIC UNIT. 562 4.1.1.11 | Details 4.1.3.30 | Details
4 4CRY 3 G ASPARTATE 1-DECARBOXYLASE RESIDUES 25-126 AFTER CLEAVAGE OF POLYPEPTIDE CHAIN BACKBONE BETWEEN RESIDUES G24 AND S25 562 4.1.1.11 | Details 4.1.3.30 | Details
5 3TM7 2 B, D Aspartate 1-decarboxylase alpha chain 562 4.1.1.11 | Details 4.1.3.30 | Details
6 1PYU 2 B, D Aspartate 1-decarboxylase alfa chain 562 4.1.1.11 | Details 4.1.3.30 | Details
7 6RXH 2 B, E Aspartate 1-decarboxylase ADC alpha-chain after post-translational modification 562 4.1.1.11 | Details 4.1.3.30 | Details
8 4D7Z 2 B ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN RESIDUE 25 IS A COVALENTLY LINKED PYRUVOYL COFACTOR, DERIVED FROM POSTTRANSLATIONAL MODIFICATION OF THE ZYMOGEN. RESIDUES 25-119 562 4.1.1.11 | Details 4.1.3.30 | Details
9 1AW8 2 B, E L-ASPARTATE-ALPHA-DECARBOXYLASE microheterogeneity at residue B25 562 4.1.1.11 | Details 4.1.3.30 | Details