Sequence Similarity Clusters for the Entities in PDB 1AMU

Entity #1 | Chains: A,B
GRAMICIDIN SYNTHETASE 1 protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44340
95 % 1 1 39667 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 37845
70 % 1 1 33614
50 % 1 1 29215
40 % 2 6 10533
30 % 19 47 915

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures