Sequence Similarity Clusters for the Entities in PDB 1AIH

Entity #1 | Chains: A,B,C,D
HP1 INTEGRASE protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21672
95 % 1 1 21489 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.1
PDBFlex
90 % 1 1 20227
70 % 1 1 18703
50 % 1 1 17181
40 % 1 1 15836
30 % 1 1 14285

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures