Sequence Similarity Clusters for the Entities in PDB 1ADQ

Entity #1 | Chains: A
IGG4 REA FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 85099
95 % 159 182 118 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 102 109 266
70 % 172 199 124
50 % 183 210 133
40 % 183 210 150
30 % 194 229 137
Entity #2 | Chains: L
IGM-LAMBDA RF-AN FAB (LIGHT CHAIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 85100
95 % 10 13 2747 Flexibility: Medium
Max RMSD: 10.4, Avg RMSD: 3.7
PDBFlex
90 % 28 34 932
70 % 455 615 8
50 % 2445 3071 2
40 % 2445 3071 2
30 % 4960 6236 1
Entity #3 | Chains: H
IGM-LAMBDA RF-AN FAB (HEAVY CHAIN) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 85101
95 % 1 1 57682
90 % 1 1 54424
70 % 9 9 5495
50 % 2482 3121 1
40 % 2482 3121 1
30 % 4961 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures