Sequence Similarity Clusters for the Entities in PDB 1A9U

Entity #1 | Chains: A
MAP KINASE P38 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 119 173 189
95 % 189 276 134 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.5
PDBFlex
90 % 189 276 140
70 % 186 270 158
50 % 196 289 166
40 % 246 397 124
30 % 246 397 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures