Sequence Similarity Clusters for the Entities in PDB 1A86

Entity #1 | Chains: A
MMP-8 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 24 1898
95 % 25 25 2388 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 25 25 2403
70 % 25 25 2463
50 % 230 235 123
40 % 239 244 138
30 % 239 244 144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures