1A43

STRUCTURE OF THE HIV-1 CAPSID PROTEIN DIMERIZATION DOMAIN AT 2.6A RESOLUTION


Sequence Similarity Clusters for the Entities in PDB 1A43

Entity #1 | Chains: A
HIV-1 CAPSID protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 9650
95 % 13 20 1849
90 % 13 20 1895
70 % 13 20 1966
50 % 13 20 2018
40 % 13 20 2043
30 % 13 21 1972

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3DS4 1 A, B HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278-363 11676
2 3DS2 1 A, B HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278-363 11676
3 2XT1 1 A GAG POLYPROTEIN C-TERMINAL DOMAIN, RESIDUES 146-231 11676
4 4COC 1 A, B, C CAPSID PROTEIN P24 C-TERMINAL DOMAIN, RESIDUES 278-363 11676
5 4IPY 1 A, B, C, D Capsid protein p24 C-TERMINAL DOMAIN, RESIDUES 278-363 11676
6 3DS0 1 A HIV-1 CAPSID PROTEIN C-terminal domain, residues 278-363 11676
7 3DS1 1 A HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278-363 11676
8 2BUO 1 A HIV-1 CAPSID PROTEIN C-TERMINAL DOMAIN, RESIDUES 278-363 11676
9 3DPH 1 A, B HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278 to 363 11676
10 4COP 1 A, B CAPSID PROTEIN P24 C-TERMINAL DOMAIN, RESIDUES 278-363 11676
11 3LRY 1 A, B HIV-1 capsid protein C-terminal domain, dimerization domain 11676
12 3DS5 1 A, B, C, D HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278-363 11676
13 1A43 1 A HIV-1 CAPSID C-TERMINAL DOMAIN OF HIV-1 CAPSID PROTEIN RESIDUES 146-231 (CAPSID NUMBERING) 11676
14 3DS3 1 A, B HIV-1 CAPSID PROTEIN C-terminal domain, UNP residues 278-363 11676
15 6BHR 1 G Capsid protein p24,Spacer peptide 1 11676
16 4M0I 1 A HIV-1 CAPSID PROTEIN C-TERMINAL DOMAIN, residues 146-231 11676
17 2KOD 1 A, B HIV-1 CA C-terminal domain 11676
18 3DTJ 1 A, B, C, D HIV-1 capsid protein C-terminal domain, UNP residues 278-363 11676
19 2JYG 1 A Capsid protein p24 (CA) residues 280-363 11676
20 2JO0 1 A Gag-Pol polyprotein Sequence database residues 278-363 11676 3.4.23.16 | Details