Sequence Similarity Clusters for the Entities in PDB 1A01

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 218 38
95 % 43 255 37 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 44 256 40
70 % 56 339 19
50 % 124 734 6
40 % 124 734 6
30 % 137 779 9
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9686
95 % 43 256 34 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 44 261 36
70 % 56 349 17
50 % 125 734 6
40 % 125 734 6
30 % 138 779 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures