6CW4

HADDOCK structure of the Rous sarcoma virus matrix protein (M-domain) in complex with inositol 1,3,5-trisphosphate


SOLUTION NMR Experimental Data


Experimental Details
Sample Conditions
Sample Contents100 uM [U-98% 15N] Matrix protein, 50 mM sodium phosphate, 2 mM TCEP, 1.6 mM IP3, 95% H2O/5% D2O
Solvent95% H2O/5% D2O
Ionic Strength100
pH6
Pressure1
Temperature (K)305
Experiment(s):2D 1H-15N HSQC
Spectrometer Information
Manufacturer Model Field Strength
Bruker AVANCE II 700.0
NMR Refinement
Method torsion angle dynamics
NMR Ensemble Information
Conformer Selection Criteria structures with the lowest energy
Conformers Calculated Total Number 200
Conformers Submitted Total Number 20
Representative Model Choice Rationale
1 medoid
Computation: NMR Software
# Classification Software Name Author
1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2 data analysis Analysis CCPN
3 structure calculation HADDOCK Bonvin
4 geometry optimization CNS Brunger, Adams, Clore, Gros, Nilges and Read