X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion
Temperature 289.0
Details 0.3 M Magnesium formate dehydrate 0.1 M BIS-TRIS pH 5.5 50mM KF

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 95.04 α = 90
b = 123.89 β = 90
c = 51.2 γ = 90
Symmetry
Space Group P 21 21 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 94
Diffraction Detector
Detector Diffraction Type Details Collection Date
PIXEL DECTRIS PILATUS3 S 6M -- 2014-02-25
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF BEAMLINE ID23-1 1 ESRF ID23-1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.99 47.52 99.0 0.07599 -- -- 6.6 278257 42321 -- -- 49.61
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.987 2.058 97.0 1.275 -- 1.44 6.5 26351

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 2.4 47.521 -- 1.36 -- 24293 1227 99.66 -- 0.253 0.2519 0.2745 --
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 35.2941
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2213
Nucleic Acid Atoms 1370
Heterogen Atoms 0
Solvent Atoms 14

Software

Software
Software Name Purpose
REFMAC refinement
Aimless data scaling
PDB_EXTRACT data extraction version: 3.22
xia2 data reduction
PHENIX phasing