X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Sitting Drop
pH 6
Temperature 289.0
Details 0.2M sodium dihydrogen phosphate, 20% PEG 3350, PH 6.0

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 30.95 α = 71.54
b = 31.12 β = 77.42
c = 32.18 γ = 89.44
Symmetry
Space Group P 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
PIXEL DECTRIS PILATUS 200K -- 2015-10-12
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE RIGAKU MICROMAX-007 HF 1.54 -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.8 30.15 65.0 0.207 -- -- 1.7 -- 6651 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.8 1.87 -- 0.426 -- -- -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.801 30.15 -- 1.99 -- 6648 387 64.71 -- 0.2253 0.2193 0.3098 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.8012 2.0617 -- 73 1207 0.2723 0.4363 -- 37.0
X Ray Diffraction 2.0617 2.5974 -- 159 2557 0.2526 0.3471 -- 79.0
X Ray Diffraction 2.5974 30.154 -- 155 2497 0.182 0.2558 -- 78.0
RMS Deviations
Key Refinement Restraint Deviation
f_angle_d 1.052
f_bond_d 0.008
f_plane_restr 0.004
f_dihedral_angle_d 19.722
f_chiral_restr 0.068
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1175
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 119

Software

Software
Software Name Purpose
PHENIX refinement version: (1.10.1_2155: ???)