X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 8
Temperature 293.0
Details ammonium nitrate, PEG 3350

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 155.4 α = 90
b = 71.84 β = 113.27
c = 76.4 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315r -- 2009-07-22
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ALS BEAMLINE 8.2.1 0.9998 ALS 8.2.1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.55 38.56 99.0 -- -- -- 1.9 -- 110980 -- -- --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.55 1.605 92.0 -- -- 1.32 -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 1.55 38.56 -- 1.34 -- 110937 5572 99.08 -- 0.1763 0.1749 0.2029 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.55 1.5676 -- 177 3121 0.3001 0.3225 -- 89.0
X Ray Diffraction 1.5676 1.5861 -- 173 3276 0.2827 0.2756 -- 92.0
X Ray Diffraction 1.5861 1.6054 -- 185 3277 0.2681 0.285 -- 95.0
X Ray Diffraction 1.6054 1.6257 -- 170 3502 0.2546 0.3118 -- 98.0
X Ray Diffraction 1.6257 1.6471 -- 182 3551 0.232 0.2529 -- 100.0
X Ray Diffraction 1.6471 1.6697 -- 182 3547 0.2273 0.2437 -- 100.0
X Ray Diffraction 1.6697 1.6935 -- 182 3515 0.2216 0.2693 -- 100.0
X Ray Diffraction 1.6935 1.7188 -- 165 3517 0.214 0.257 -- 100.0
X Ray Diffraction 1.7188 1.7457 -- 185 3575 0.2169 0.2475 -- 100.0
X Ray Diffraction 1.7457 1.7743 -- 188 3514 0.2061 0.2371 -- 100.0
X Ray Diffraction 1.7743 1.8049 -- 171 3563 0.2049 0.2622 -- 100.0
X Ray Diffraction 1.8049 1.8377 -- 168 3509 0.195 0.2376 -- 100.0
X Ray Diffraction 1.8377 1.8731 -- 183 3561 0.1872 0.2267 -- 100.0
X Ray Diffraction 1.8731 1.9113 -- 200 3532 0.1816 0.2158 -- 100.0
X Ray Diffraction 1.9113 1.9529 -- 168 3540 0.1839 0.2108 -- 100.0
X Ray Diffraction 1.9529 1.9983 -- 182 3547 0.1815 0.2085 -- 100.0
X Ray Diffraction 1.9983 2.0483 -- 200 3517 0.1812 0.2119 -- 100.0
X Ray Diffraction 2.0483 2.1036 -- 177 3527 0.1809 0.1905 -- 100.0
X Ray Diffraction 2.1036 2.1655 -- 194 3510 0.1742 0.2221 -- 100.0
X Ray Diffraction 2.1655 2.2354 -- 223 3516 0.1695 0.1987 -- 100.0
X Ray Diffraction 2.2354 2.3153 -- 205 3566 0.1675 0.1849 -- 100.0
X Ray Diffraction 2.3153 2.408 -- 193 3495 0.1722 0.2221 -- 100.0
X Ray Diffraction 2.408 2.5176 -- 222 3538 0.1736 0.1921 -- 100.0
X Ray Diffraction 2.5176 2.6503 -- 197 3528 0.1691 0.204 -- 100.0
X Ray Diffraction 2.6503 2.8163 -- 170 3583 0.1608 0.2034 -- 100.0
X Ray Diffraction 2.8163 3.0337 -- 192 3541 0.1624 0.2004 -- 100.0
X Ray Diffraction 3.0337 3.3389 -- 174 3578 0.1602 0.1993 -- 100.0
X Ray Diffraction 3.3389 3.8218 -- 180 3599 0.1542 0.1583 -- 100.0
X Ray Diffraction 3.8218 4.814 -- 195 3578 0.1431 0.1714 -- 100.0
X Ray Diffraction 4.814 42.3871 -- 189 3642 0.182 0.1998 -- 99.0
RMS Deviations
Key Refinement Restraint Deviation
f_angle_d 1.677
f_plane_restr 0.009
f_bond_d 0.017
f_dihedral_angle_d 14.548
f_chiral_restr 0.088
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 4932
Nucleic Acid Atoms 0
Heterogen Atoms 64
Solvent Atoms 541

Software

Software
Software Name Purpose
PHENIX refinement version: dev_1839
HKL-2000 data reduction
Aimless data scaling
PHASER phasing