X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7
Details PH 7.0

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 86.05 α = 90
b = 86.05 β = 90
c = 108.74 γ = 90
Symmetry
Space Group P 43 21 2

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC CCD -- 2014-09-19
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 -- Australian Synchrotron MX2

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.24 40 99.9 0.07 -- -- 14.2 -- 20251 -- 2.0 --
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.24 2.32 99.2 0.78 -- 3.89 14.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.24 40.009 -- 1.36 -- 20250 1013 99.93 -- 0.1906 0.1878 0.2447 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.2403 2.3584 -- 140 2665 0.263 0.3823 -- 99.0
X Ray Diffraction 2.3584 2.5061 -- 143 2703 0.2147 0.2613 -- 100.0
X Ray Diffraction 2.5061 2.6996 -- 142 2705 0.2017 0.3084 -- 100.0
X Ray Diffraction 2.6996 2.9711 -- 143 2723 0.2022 0.2343 -- 100.0
X Ray Diffraction 2.9711 3.4009 -- 145 2743 0.2097 0.2662 -- 100.0
X Ray Diffraction 3.4009 4.284 -- 145 2767 0.1728 0.2256 -- 100.0
X Ray Diffraction 4.284 40.0151 -- 155 2931 0.1647 0.2137 -- 100.0
RMS Deviations
Key Refinement Restraint Deviation
f_chiral_restr 0.042
f_plane_restr 0.005
f_angle_d 1.105
f_dihedral_angle_d 23.231
f_bond_d 0.007
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2643
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 44

Software

Software
Software Name Purpose
PHENIX refinement version: (PHENIX.REFINE: 1.9_1692)
XDS data scaling
PHASER phasing