X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
Method Vapor Diffusion Hanging Drop
pH 8
Temperature 296.0
Details 0.1 M Tris HCl, 30% Jeffamine M-600

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 24.88 α = 98.94
b = 41.55 β = 92.25
c = 133.2 γ = 90.06
Symmetry
Space Group P 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- 2012-11-15
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ALS BEAMLINE 8.2.2 0.999 ALS 8.2.2

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.8 50 94.2 -- -- -- 1.9 -- 12173 -- -- --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
-- 2.8 43.826 -- 1.97 -- 12173 663 94.1 -- -- 0.2644 0.31 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.8 3.0851 -- 168 2776 0.2422 0.304 -- 86.0
X Ray Diffraction 3.0851 3.5295 -- 151 2811 0.2294 0.3178 -- 88.0
X Ray Diffraction 3.5295 4.4395 -- 149 2934 0.2151 0.2535 -- 92.0
X Ray Diffraction 4.4395 20.5728 -- 150 2965 0.3093 0.3463 -- 92.0
RMS Deviations
Key Refinement Restraint Deviation
f_chiral_restr 0.064
f_plane_restr 0.006
f_bond_d 0.013
f_angle_d 1.569
f_dihedral_angle_d 19.094
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 3881
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 7

Software

Software
Software Name Purpose
PHENIX refinement version: (phenix.refine: 1.8.2_1309)