X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 34.49 α = 90
b = 59.6 β = 104.65
c = 53.42 γ = 90
Symmetry
Space Group P 1 21 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON DIAMOND BEAMLINE I04 0.9795 Diamond I04

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.1 60 88.0 -- -- -- -- 12390 10903 0.0 0.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.1 39.047 -- 0.38 10562 10057 505 87.89 0.231 0.1803 0.178 0.2264 random
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.1 2.2107 -- 79 1711 0.2399 0.3046 -- 52.0
X Ray Diffraction 2.2107 2.3492 -- 113 2410 0.2199 0.3064 -- 74.0
X Ray Diffraction 2.3492 2.5306 -- 170 3040 0.2018 0.2489 -- 93.0
X Ray Diffraction 2.5306 2.7852 -- 151 3231 0.1964 0.2308 -- 100.0
X Ray Diffraction 2.7852 3.188 -- 174 3260 0.1952 0.2543 -- 100.0
X Ray Diffraction 3.188 4.0159 -- 170 3251 0.1619 0.2133 -- 100.0
X Ray Diffraction 4.0159 39.0535 -- 154 3210 0.1591 0.1998 -- 98.0
RMS Deviations
Key Refinement Restraint Deviation
f_bond_d 0.003
f_plane_restr 0.003
f_chiral_restr 0.043
f_angle_d 0.735
f_dihedral_angle_d 16.887
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 1499
Nucleic Acid Atoms 0
Heterogen Atoms 1
Solvent Atoms 49

Software

Software
Software Name Purpose
ADSC data collection version: Quantum
PHASER phasing
PHENIX refinement version: (phenix.refine: 1.8.1_1168)
MOSFLM data reduction
SCALA data scaling