X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 40.67 α = 90
b = 89.6 β = 90
c = 135.46 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
PIXEL DECTRIS PILATUS 6M -- --
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON DIAMOND BEAMLINE I04-1 -- Diamond I04-1

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.47 67.7 98.5 0.08 -- -- 6.6 -- 18171 -- 3.1 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 2.47 67.73 -- -- -- 17212 927 98.06 -- 0.1928 0.19038 0.23744 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.47 2.534 -- 70 1105 0.258 0.383 -- 93.33
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 42.122
Anisotropic B[1][1] 0.63
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -0.29
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -0.33
RMS Deviations
Key Refinement Restraint Deviation
r_gen_planes_other 0.001
r_dihedral_angle_1_deg 6.356
r_gen_planes_refined 0.007
r_dihedral_angle_4_deg 18.912
r_angle_other_deg 0.956
r_chiral_restr 0.093
r_bond_other_d 0.001
r_dihedral_angle_3_deg 17.336
r_bond_refined_d 0.014
r_angle_refined_deg 1.673
r_dihedral_angle_2_deg 35.808
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 3346
Nucleic Acid Atoms 0
Heterogen Atoms 60
Solvent Atoms 77

Software

Software
Software Name Purpose
REFMAC refinement version: 5.6.0117