X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystallization

Crystalization Experiments
pH 7
Details pH 7

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 46.5 α = 95.24
b = 92.78 β = 98.95
c = 100.46 γ = 96.73
Symmetry
Space Group P 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD MARMOSAIC 225 mm CCD MIRRORS 2011-07-15
Diffraction Radiation
Monochromator Protocol
SI(111) SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON SLS BEAMLINE X06DA -- SLS X06DA

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.3 70.5 96.6 0.03 -- -- 2.2 -- 70114 -- 0.0 56.54
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
2.3 2.44 9.0 0.73 -- 1.3 2.2 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
SAD 2.3 98.62 -- 0.0 -- 70107 3535 96.4 -- 0.2044 0.2025 0.2404 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.3 2.36 -- 246 4752 0.2449 0.2758 -- 96.4
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 74.15
Anisotropic B[1][1] -8.993
Anisotropic B[1][2] 0.056
Anisotropic B[1][3] 9.3588
Anisotropic B[2][2] 6.4162
Anisotropic B[2][3] -2.2349
Anisotropic B[3][3] 2.5769
RMS Deviations
Key Refinement Restraint Deviation
t_omega_torsion 3.02
t_angle_deg 1.13
t_other_torsion 19.13
t_bond_d 0.009
Coordinate Error
Parameter Value
Luzzati ESD (Observed) 0.415
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 11663
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 234

Software

Software
Software Name Purpose
BUSTER refinement version: 2.10.0
XDS data reduction
XSCALE data scaling
SHELXE phasing