X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 51.06 α = 102.62
b = 82.58 β = 105.43
c = 96.97 γ = 110.79
Symmetry
Space Group P 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC QUANTUM 315 -- 2008-06-02
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON APS BEAMLINE 17-ID 1.0 APS 17-ID

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.2 50 88.5 0.068 -- -- 1.7 -- 61073 -- 2.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.2 10.0 -- -- -- 56486 3049 88.53 -- 0.242 0.23929 0.29377 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.2 2.254 -- 196 3681 0.432 0.481 -- 81.11
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 46.903
Anisotropic B[1][1] -0.87
Anisotropic B[1][2] 0.8
Anisotropic B[1][3] -0.95
Anisotropic B[2][2] 3.56
Anisotropic B[2][3] 0.55
Anisotropic B[3][3] -2.39
RMS Deviations
Key Refinement Restraint Deviation
r_chiral_restr 0.103
r_bond_refined_d 0.018
r_mcangle_it 2.233
r_scbond_it 3.479
r_dihedral_angle_2_deg 35.436
r_mcbond_it 1.065
r_dihedral_angle_1_deg 5.784
r_angle_other_deg 1.373
r_gen_planes_other 0.003
r_gen_planes_refined 0.01
r_scangle_it 6.079
r_bond_other_d 0.003
r_angle_refined_deg 1.706
r_mcbond_other 0.244
r_dihedral_angle_4_deg 24.728
r_dihedral_angle_3_deg 20.528
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 10932
Nucleic Acid Atoms 0
Heterogen Atoms 260
Solvent Atoms 320

Software

Software
Software Name Purpose
REFMAC refinement version: 5.4.0069