X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 99.99 α = 90
b = 99.99 β = 90
c = 111.3 γ = 120
Symmetry
Space Group P 32

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 287
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON ESRF -- ESRF --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.35 30 98.5 0.11 -- -- 3.0 -- 51912 -- 2.0 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
OTHER 2.35 12.0 -- -- -- 50230 472 98.41 -- 0.25936 0.25897 0.29861 RANDOM
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.349 2.408 -- 25 3426 0.305 0.642 -- 92.77
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 17.07
Anisotropic B[1][1] 2.78
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] 2.78
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -5.56
RMS Deviations
Key Refinement Restraint Deviation
r_dihedral_angle_2_deg 39.25
r_mcbond_it 0.981
r_bond_refined_d 0.023
r_gen_planes_refined 0.01
r_scangle_it 3.864
r_angle_refined_deg 2.019
r_dihedral_angle_1_deg 8.612
r_scbond_it 2.652
r_dihedral_angle_4_deg 18.449
r_mcangle_it 1.71
r_dihedral_angle_3_deg 19.245
r_chiral_restr 0.137
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 6423
Nucleic Acid Atoms 0
Heterogen Atoms 30
Solvent Atoms 216

Software

Software
Software Name Purpose
REFMAC refinement version: 5.5.0088