X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 101.64 α = 90
b = 56.88 β = 133.63
c = 81.84 γ = 90
Symmetry
Space Group C 1 2 1

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Detector
Detector Diffraction Type Details Collection Date
CCD ADSC CCD -- 2010-04-26
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
SYNCHROTRON DIAMOND BEAMLINE I03 -- Diamond I03

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
1.9 46.52 99.4 0.06 -- -- 3.6 -- 26646 -- 6.0 18.5
High Resolution Shell
Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All)
1.9 2.0 99.7 0.4 -- 2.5 3.6 --

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 1.98 36.784 -- 0.03 -- 22973 1165 96.84 -- 0.1589 0.1566 0.2012 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 1.98 2.0701 -- 157 2625 0.169 0.21 -- 94.0
X Ray Diffraction 2.0701 2.1792 -- 143 2638 0.1621 0.2256 -- 95.0
X Ray Diffraction 2.1792 2.3158 -- 134 2690 0.1483 0.2052 -- 96.0
X Ray Diffraction 2.3158 2.4945 -- 117 2745 0.1449 0.1766 -- 97.0
X Ray Diffraction 2.4945 2.7455 -- 145 2750 0.1462 0.2085 -- 97.0
X Ray Diffraction 2.7455 3.1426 -- 149 2769 0.1488 0.2193 -- 99.0
X Ray Diffraction 3.1426 3.9586 -- 138 2789 0.1449 0.1816 -- 99.0
X Ray Diffraction 3.9586 36.7904 -- 182 2802 0.167 0.1908 -- 98.0
Temperature Factor Modeling
Temperature Factor Value
Mean Isotropic B 30.82
Anisotropic B[1][1] -1.0725
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] -6.3588
Anisotropic B[2][2] -4.891
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] 5.9635
RMS Deviations
Key Refinement Restraint Deviation
f_bond_d 0.01
f_plane_restr 0.005
f_chiral_restr 0.087
f_dihedral_angle_d 19.784
f_angle_d 1.212
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 2075
Nucleic Acid Atoms 0
Heterogen Atoms 63
Solvent Atoms 224

Software

Software
Software Name Purpose
PHENIX refinement version: (PHENIX.REFINE)
MOSFLM data reduction
SCALA data scaling
PHASER phasing