X-RAY DIFFRACTION Experimental Data & Validation


X-ray Experimental Help

Crystal Data

Unit Cell
Length (Å) Angle (°)
a = 79.95 α = 90
b = 122.46 β = 90
c = 222.91 γ = 90
Symmetry
Space Group P 21 21 21

Diffraction

Diffraction Experiment
ID # Data Collection Temperature
1 100
Diffraction Radiation
Monochromator Protocol
-- SINGLE WAVELENGTH
Diffraction Detector Source
Source Type Wavelength List Synchrotron Site Beamline
ROTATING ANODE -- -- -- --

Data Collection

Overall
Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot
2.7 30 92.5 0.16 -- -- 2.6 -- 46459 -- 1.7 78.02

Refinement

Statistics
Structure Solution Method Refinement High Resolution Refinement Low Resolution Cut-off Sigma (I) Cut-off Sigma (F) Number of Reflections (All) Number of Reflections (Observed) Number of Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work R-Free R-Free Selection Details
MOLECULAR REPLACEMENT 2.706 29.522 -- 1.33 -- 46459 2336 76.79 -- 0.2685 0.2668 0.301 --
High Resolution Shell
Refinement method Shell Resolution (High) Shell Resolution (Low) # of Reflections (Observed) # of Reflections (R-Free) # of Reflections (R-Work) R-Factor (R-Work) R-Factor (R-Free) R-Factor (R-Free Error) Percent Reflections (Observed)
X Ray Diffraction 2.7062 2.7614 -- 6 178 0.4015 0.4583 -- 5.0
X Ray Diffraction 2.7614 2.8214 -- 24 451 0.3962 0.4189 -- 14.0
X Ray Diffraction 2.8214 2.887 -- 40 859 0.4012 0.3697 -- 26.0
X Ray Diffraction 2.887 2.9591 -- 70 1437 0.4029 0.4458 -- 43.0
X Ray Diffraction 2.9591 3.039 -- 106 2094 0.4171 0.4144 -- 63.0
X Ray Diffraction 3.039 3.1283 -- 144 2590 0.3891 0.4305 -- 78.0
X Ray Diffraction 3.1283 3.2292 -- 169 3100 0.3811 0.4607 -- 93.0
X Ray Diffraction 3.2292 3.3445 -- 171 3362 0.3519 0.4409 -- 100.0
X Ray Diffraction 3.3445 3.4782 -- 164 3353 0.3415 0.3403 -- 99.0
X Ray Diffraction 3.4782 3.6362 -- 188 3328 0.3076 0.3305 -- 99.0
X Ray Diffraction 3.6362 3.8275 -- 178 3307 0.2978 0.293 -- 99.0
X Ray Diffraction 3.8275 4.0668 -- 185 3294 0.2648 0.2954 -- 98.0
X Ray Diffraction 4.0668 4.3798 -- 182 3332 0.2445 0.2639 -- 98.0
X Ray Diffraction 4.3798 4.8189 -- 185 3324 0.1982 0.2617 -- 98.0
X Ray Diffraction 4.8189 5.5123 -- 170 3401 0.196 0.2095 -- 99.0
X Ray Diffraction 5.5123 6.93 -- 185 3452 0.2127 0.2529 -- 100.0
X Ray Diffraction 6.93 29.5233 -- 169 3261 0.2421 0.2728 -- 90.0
Temperature Factor Modeling
Temperature Factor Value
Anisotropic B[1][1] 10.8574
Anisotropic B[1][2] 0.0
Anisotropic B[1][3] 0.0
Anisotropic B[2][2] -0.6845
Anisotropic B[2][3] 0.0
Anisotropic B[3][3] -10.1729
RMS Deviations
Key Refinement Restraint Deviation
f_angle_d 0.932
f_plane_restr 0.004
f_dihedral_angle_d 16.747
f_bond_d 0.006
f_chiral_restr 0.061
Number of Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms Numbers
Protein Atoms 11265
Nucleic Acid Atoms 0
Heterogen Atoms 0
Solvent Atoms 0

Software

Software
Software Name Purpose
PHENIX refinement version: (PHENIX.REFINE)